1.- Yannis Burnier1, Cedric Weber1, Alessandro Flammini2 and Andrzej Stasiak
Local selection rules that can determine specific pathways of DNA unknotting by type II DNA topoisomerases (2007)
Nucleic Acids Research, doi:10.1093/nar/gkm532
2.- Zhirong Liu, Jennifer K. Mann, E. Lynn Zechiedrich, and Hue Sun Chan
Topological Information Embodied in Local Juxtaposition Geometry Provides a Statistical Mechanical Basis for Unknotting by Type-2 DNA Topoisomerases(2006)
Journal of Molecular BiologyVolume 361, Issue 2,268-285
3.- Title: Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: Excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models
Author(s): Liu ZR, Chan HS
Source: JOURNAL OF CHEMICAL PHYSICS Volume: 128 Issue: 14 Article Number: 145104 Published: APR 14 2008
4.- Title: 3D visualization software to analyze topological outcomes of topoisomerase reactions
Author(s): Darcy IK, Scharein RG, Stasiak A
Source: NUCLEIC ACIDS RESEARCH Volume: 36 Issue: 11 Pages: 3515-3521 Published: JUN 2008